Hmm. It would be very helpfull if you can tell me from which version you are upgrading from and to what version you are upgrading to.
You can find the current version you are using in the NodeCanvas graph editor toolbar (on the top right). If for any reason you can’t open the graph editor, you can also find the current version in the source code and into the GraphSerializationData.cs file (there is a constant field named “FRAMEWORK_VERSION”.)
With that said, there has very recently been a new version release (on 26 March), which fixes a very critical serialization bug which did have to do with the errors you are encountering (“Internal Deserialization Error – Object Definition has not been encountered……”).
Can you please try updating from the asset store the that new version 2.9.2 (if not the one you already are updating to) and let me know?
Also, do you by any chance have placed NodeCanvas in the “Plugins” folder, or placed it into any custom Assembly Definition?
Have you tried making a clean install by completely removing the previous version folder and re-importing from the asset store anew?
Please let me know.
Thank you.
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